BME 580.688/580.488, CS 600.688/600.488, Spring 2009
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Assignments
Title Due Date Useful stuff Solutions
HW1 Midnight Feb. 9 Homework 1 statistics
 Homework 1 Solutions
Prog 2 Midnight Friday, March 13 Prokaryotic genomes
A.fulgidus.fa.gz
A.pernix.fa.gz
H.influenzae.fa.gz
H.pylori.fa.gz
M.jannaschii.fa.gz
M.thermoautotrophicus.fa.gz
N.meningitidus.fa.gz
P.abyssi.fa.gz
P.furiosus.fa.gz
P.horikoshii.fa.gz
S.acidocaldarius.fa.gz
S.solfataricus.fa.gz
S.tokadaii.fa.gz
V.cholerae.I.fa.gz
V.cholerae.II.fa.gz
V.fischeri.I.fa.gz
V.fischeri.II.fa.gz
V.parahaemolyticus.I.fa.gz
V.parahaemolyticus.II.fa.gz
V.vulnificus.I.fa.gz
V.vulnificus.II.fa.gz
  
Prog 3 Midnight Friday, May 1 Markov chains and relative entropy
pdb-sequences-1.fa
pdb-sequences-2.fa